CDS

Accession Number TCMCG017C12352
gbkey CDS
Protein Id OMO97991.1
Location complement(join(1579..1764,2831..2878,3395..3476,3815..4104,4170..4270,4387..4408,4495..4533,4664..4692,4778..4853,4945..5012,5124..5239,5305..5372,5457..5556,5678..5754,6045..6171,6259..6320))
GeneID InterPro:IPR001650
Organism Corchorus olitorius
locus_tag COLO4_14188

Protein

Length 496aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015392.1
Definition hypothetical protein COLO4_14188 [Corchorus olitorius]
Locus_tag COLO4_14188

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the DEAD box helicase family
KEGG_TC -
KEGG_Module M00428        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K03257        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATTCAAGAAGCTCTTGGTATGCAGAAGGTGCTACACCACCATGCTTATCAATAAGCAGAGGTATGGTCGTCTGCCATTTTGCCACATTTGAAAATACCAGGATTAAATGCACCCATCCCTTCTGGAAGACTGGAACAGGCTTTGGTTATCATTTTGGTGGCTGGGGCAAACCTCCTGTAGATGAGAAAGTAATGAACAACTTTAATGATGCAGATGTAAAGCCTAAATCAAACTCTGCTCCCTCAGCTATGCCTATATTAAGGGATGCAGATTCCAATTCGGTGGCTTGGCCTGTAGAGCTCATGGGTACTGCTGAACAAATTGCCAAGGCAGAGCAGTTGATAGATGATGATCTTGCTGAGACTCTTAATATACTAGGAAACATTTTTTTTTTAAAAAACTATAATTTAAATTTCATAATCACTCCTACTTCATGTCTGAAGAAGGAACGTCTCTTTCTTGAGATTCGGTTTAGAGTTTTCATCAGAATTTTCAGTTTCCTCGTTCCAATTCAAACTCTAGACAATCAACAACTTAACCAAATAGATTTGCCTTTTATTTTTATACTCTCTGGTTTGGTTATCGATGTGATCAACAATTCAGGATTCTGTTTGGTTCATGCAATTGTCGGTGGAACCAGTGTTTGGGAAGATGAATGGATTTTTACTGCTGGTGTCCATGTGGTTGTTGATGAATGCTCTCTGGGTTTTAAAGATCAGATTTATGATATATTCCAGCTACTTCCTGGAAAAATACAGCGTGATGAGCTTACCCTTGAAGGCGCAAAGTTGAGTGGCTTACCTACCAATTGTGAAGCTGTGATTACACAGTTTCTGCCACTCATGGAGACATGGACCAAAACACAAGGGATGTCATCATGCCAAGTCTCCTTGGTTATTAACTATGCTTTGCCTACTCAACCGGAGAATTATCTTCACCACATTGGTCGAAGTGGAAGATTGGGGCGTAAAGGTGCTGCAATCAATTGTGTATCACGAGATGATGACAGGATGTTGGCTGACATCCAGAGGTTCTACAATGTAGTGATTGAGGAGCTGCCAGCAAATGTTGGGGATAAAGGATTAGCTACAGAGAATATAAGATGTGATTATACAGTATATCTTTTCAGCTTACTGATTCCACTGCAGCACGGATTGAGAAATTCAGACAGGTTCTCCATGGTGCATTCTTTAAATGTCAGCCCAAGCCAAAGCTTACAACTCACGGATATCTATCAAGGGAAAGAATTTGAGGCTTTGGTTATCATTTTTGTGGCTGGGGCAAAACCTTCTGTAGATGTGGTTCAAGGTGAGTGTGAGGTAAGGTTCAAGGTGAGTGCGCCACGTAACCCCATTTGGAGCACAGCTGAATATCCGTATCGACATATCCCATTTGGAGCACTTATTGTTGCTATTATACAGGAGTGGATCATGGATCAGTGGGAGAAGAACTATTACATTAGCTCTATTGCTGGTTCTACCTGTTGA
Protein:  
MNSRSSWYAEGATPPCLSISRGMVVCHFATFENTRIKCTHPFWKTGTGFGYHFGGWGKPPVDEKVMNNFNDADVKPKSNSAPSAMPILRDADSNSVAWPVELMGTAEQIAKAEQLIDDDLAETLNILGNIFFLKNYNLNFIITPTSCLKKERLFLEIRFRVFIRIFSFLVPIQTLDNQQLNQIDLPFIFILSGLVIDVINNSGFCLVHAIVGGTSVWEDEWIFTAGVHVVVDECSLGFKDQIYDIFQLLPGKIQRDELTLEGAKLSGLPTNCEAVITQFLPLMETWTKTQGMSSCQVSLVINYALPTQPENYLHHIGRSGRLGRKGAAINCVSRDDDRMLADIQRFYNVVIEELPANVGDKGLATENIRCDYTVYLFSLLIPLQHGLRNSDRFSMVHSLNVSPSQSLQLTDIYQGKEFEALVIIFVAGAKPSVDVVQGECEVRFKVSAPRNPIWSTAEYPYRHIPFGALIVAIIQEWIMDQWEKNYYISSIAGSTC